documents main.py functions
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25
src/main.py
25
src/main.py
@@ -5,6 +5,11 @@ from classes import *
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def call_entrypoint_from_elabid(elabid):
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'''
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Calls an entrypoint sample from eLabFTW using its elabid, then returns an object of the Entrypoint class.
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If the entry is not a sample (category_title not matching exactly "Sample") returns ValueError.
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'''
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try:
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sample_data = APIHandler(apikey).get_entry_from_elabid(elabid, entryType="items")
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if not sample_data.get("category_title") == "Sample":
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@@ -15,6 +20,12 @@ def call_entrypoint_from_elabid(elabid):
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return sample_object # Entrypoint-class object
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def call_material_from_elabid(elabid):
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'''
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Calls a material from eLabFTW using its elabid, then returns an object of the Material class.
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If the entry is neither a PLD Target or a Substrate batch returns ValueError. Such entries always have a category_title key with its value either being "PLD Target" or "Substrate batch".
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Because of an old typo, the value "Subtrate batch" (second 's' is missing) is also accepted.
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'''
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try:
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material_data = APIHandler(apikey).get_entry_from_elabid(elabid, entryType="items")
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# TO-DO: correct this typo on elabftw: Subtrate → Substrate.
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@@ -26,6 +37,11 @@ def call_material_from_elabid(elabid):
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return material_object # Material-class object
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def call_layers_from_list(elabid_list):
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'''
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Calls a list of (PLD deposition) experiments from eLabFTW using their elabid - which means the input must be a list of integers instead of a single one - then returns a list of Layer-class objects.
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If one of the entries is not related to a deposition layer (category_title not matching exactly "PLD Deposition") that entry is skipped, with no error raised.
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'''
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list_of_layers = []
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for elabid in elabid_list:
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try:
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@@ -37,17 +53,20 @@ def call_layers_from_list(elabid_list):
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except ConnectionError as e:
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nums = [ layer.layer_number for layer in list_of_layers ]
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nums.sort()
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print(f"LISTA DEI LAYER PROCESSATI FINORA (in ordine sparso):\n" + str(nums))
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print(f"LIST OF THE LAYERS PROCESSED (unordered):\n" + str(nums))
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raise ConnectionError(f"An error occurred while fetching the experiment with elabid = {elabid}:\n" +
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str(e) + f"\nPlease solve the problem before retrying." + "\n\n" +
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f"Last resource attempted to call: {ELABFTW_API_URL}/experiments/{elabid}"
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)
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return list_of_layers # list of Layer-class objects
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def from_entrypoint_to_material(sample_object):
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def call_batch_from_entrypoint(sample_object):
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'''
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Takes an Entrypoint-class object, looks at its .batch_elabid attribute and returns a Material-class object containing data on the substrate batch associated to the starting sample.
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'''
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material_elabid = sample_object.batch_elabid
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material_object = call_material_from_elabid(material_elabid)
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return sample_object, material_object
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return material_object
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sample_object = call_entrypoint_from_elabid(elabid)
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from_entrypoint_to_material(sample_object)
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