API key prompt is now "echo on" - echo off was useless given the context
sample name gets trimmed so only STD-ID is preserved in the filename
filename now contains technique (PLD) and ends in .nxs
all should be right in the world - and nffa-di data research policy
compliant, spec.lly sect. 3.1.7-3.1.9
new class for the Proposals, only outputs their names
if name contains "Proposal ", that gets cropped out
if no proposal is specified the name of the sample shall not include one
TO-DO:
1. follow the "TO-DO" comments to clean the code
2. filename should be NFFA-DI compliant like:
nffa-di_NA01_Napoli_Na-26-015.h5
3. rheed data analysis should take two distinct functions
one for the raw stream and one for the image
4. if time allows: consider moving most of main.py in separate modules
method 'download_attachments_data" works with elabapi.UploadsApi() class
to download binary data and other metadata of our files.
CURRENTLY it downloads every single attachment which is not intended
and it's only for testing purposes
"download_attachments_to_disk" saves binary data to "output/attachments"
RWA_Noise has 4 columns: time and 3 intensities.
the RWA is generated through python-random starting from the original
RWA, so that every value is its corresponent in the original file times
a random float number bw/ .8 and 1.2 (noise)
separating schemas from main.py might be a good idea since the parser
will support more fabrication methods, but since every method has its
dictionary is it even possible?
the instruments_used group is still present outside the multilayer group
but currently a new instruments_used sub-group is created in the
layer-specific group
instruments used to deposit a single layer are in
/sample/multilayer/layer_N/instruments_used and there's only one value
for each category (rheed, laser, chamber)
in /instruments_used (root) for each category there's a list of every
(unique) instrument involved in the full deposition process
